Quick SearchSelect Databanks to SearchCreate your QueryUse Analysis ToolsManage your Query ResultsManage your ProjectsCreate Custom ViewsDataBanks Information Page  
Name

MITSNP

Search
Status The current release has 3358 entries and was indexed 08-Mar-2006.
Description This is the Whitehead Institute/MIT Center for Genome Research, Human SNP Mapping Project, Data Release 1 (May 1998).

Single-nucleotide polymorphisms (SNPs) are the most frequent type of variation in the human genome, and they provide powerful tools for a variety of medical genetic studies. In a large-scale survey for SNPs, 2.3 megabases of human genomic DNA was examined by a combination of gel-based sequencing and high-density variation-detection DNA chips. A total of 3241 candidate SNPs were identified. A genetic map was constructed showing the location of 2227 of these SNPs. Prototype genotyping chips were developed that allow simultaneous genotyping of 500 SNPs. The results provide a characterization of human diversity at the nucleotide level and demonstrate the feasibility of large-scale identification of human SNPs. (The Science paper abstract)

WWW http://www.genome.wi.mit.edu/SNP/human/
Ftp ftp://ftp-genome.wi.mit.edu/distribution/human_SNP_releases/
Data-fields in SRS
Field Name
Short Name
Type
No. of Keys
No. of Entry References
Indexing Date
Status
AllText all group 0 0   not indexed
ID id id 3358 3358 08-Mar-2006 ok
STS STS index 2755 3321 08-Mar-2006 ok
AccNumber acc index 904 1028 08-Mar-2006 ok
ProductLength prL num 353 3358 08-Mar-2006 ok
Species spc index 1 3358 08-Mar-2006 ok
MapLocation mlc real 1136 2262 08-Mar-2006 ok
Chromosome chr index 23 2262 08-Mar-2006 ok
Loaders
SRS Description Structure ( srsgen.i , srsdb.i , href.i )
Syntax
Information
SRS Release 7.1.3.1    Copyright © 1997-2003 LION bioscience AG. All Rights Reserved. Terms of Use Feedback